Accepted apbs 3.4.1-1 (source all amd64) into unstable, unstable

[Debian FTP Masters <ftpmaster@ftp-master.debian.org>]

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Hash: SHA256

Format: 1.8
Date: Sun, 29 May 2022 10:42:09 +0200
Source: apbs
Binary: apbs apbs-data apbs-dbgsym apbs-doc libapbs-dev libapbs3 libapbs3-dbgsym libfetk-dev libfetk1.9 libfetk1.9-dbgsym python3-apbslib python3-apbslib-dbgsym
Architecture: source all amd64
Version: 3.4.1-1
Distribution: unstable
Urgency: medium
Maintainer: Debichem Team <debichem-devel@lists.alioth.debian.org>
Changed-By: Drew Parsons <dparsons@debian.org>
Description:
 apbs       - Adaptive Poisson Boltzmann Solver
 apbs-data  - data files for APBS (Adaptive Poisson Boltzmann Solver)
 apbs-doc   - Adaptive Poisson Boltzmann Solver
 libapbs-dev - Adaptive Poisson Boltzmann Solver
 libapbs3   - Adaptive Poisson Boltzmann Solver
 libfetk-dev - FETK libraries for APBS (development headers)
 libfetk1.9 - FETK libraries for APBS (shared libraries)
 python3-apbslib - Adaptive Poisson Boltzmann Solver
Changes:
 apbs (3.4.1-1) unstable; urgency=medium
 .
   * Team upload.
   * New upstream release.
     - requires FETK
     - Build-Depends: pybuild-plugin-pyproject, python3-pybind11
     - drop deprecated debian patches debian_make.patch and
       link_libapbs_routines.patch
   * provide FETK external source as a git subtree in
     debian/external_deps/fetk. Source is pulled from
     https://github.com/Electrostatics/FETK, the required
     version is specified in the toplevel apbs CMakeLists.txt
     - pull FETK 1.9.3 (commit 57195e5) to use system SuperLU
     - patch to use system maloc (don't build local maloc)
     - patch mc and punc with BLA_STATIC OFF to used BLAS shared
       libraries, and don't specify BLA_VENDOR OpenBLAS (use generic
       blas to allow for alternative optimised BLASes)
     - build FETK libraries (libmc.so, libgamer.so, libpunc.so,
       also punc components libcgcode.so, libvf2c.so)
       with soname set by FETK project minor version (currently 1.9)
     - provide FETK libraries in libfetk-dev and libfetk1.9 packages.
     - FETK copyright licence is LGPL-2.1+
     - Build-Depends: libsuitesparse-dev (for libumfpack),
       libarpack2-dev
   * python3-apbslib provides both apbs and apbslib python modules
   * update debian/rules
     - specify cmake build with source at top level
     - specify APBS_STATIC_BUILD=Off
   * update debian patch python3.patch to fix check of PYTHON_MAX_VERSION
     and only copy python library files to a pdb2pka dir it exists
   * add debian patch cmake.patch
     - adjusts upstream cmake files to install headers in
       /usr/include/apbs, and don't install (unformed) docs
     - add RPC_CFLAGS (/usr/include/tirpc) to CFLAGS in
       ImportFETK.cmake to include FETK RPC support.
       Build-Depends: libtirpc-dev (using pkg-config)
     - treat PYTHON_VERSION (3.6) as minimum not exact version
     - skip RPATH in shared library build (CMAKE_SKIP_RPATH=ON)
   * provide apbs-doc package
     - build user docs with sphinxdoc, libjs-mathjax
     - Build-Depends-Indep: python3-sphinx-rtd-theme
   * fix ©,Å symbols with UTF-8 via debian patch
     fix_spelling_errors.patch and direct in FETK
   * add apbs_check_intermediate_energies.py to
     debian patch wrong-path-for-interpreter.patch and replace with
     "env python3" as needed (following upstream more closely)
   * update upstream source to https://github.com/Electrostatics/apbs
   * upstream source no longer includes pdb2pqr, don't need to
     exclude it and repackage the source (drop +dfsg1)
   * Standards-Version: 4.6.0
   * lintian updates
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Files:
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