Accepted debian-med 3.5 (source) into unstable
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Hash: SHA256
Format: 1.8
Date: Thu, 28 Nov 2019 09:25:44 +0100
Source: debian-med
Binary: med-tasks med-config med-all med-bio med-bio-dev med-cloud med-data med-dental med-epi med-his med-imaging med-imaging-dev med-laboratory med-oncology med-pharmacy med-physics med-practice med-psychology med-research med-statistics med-tools med-typesetting
Architecture: source
Version: 3.5
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Changed-By: Andreas Tille <tille@debian.org>
Description:
med-all - Default selection of tasks for Debian Med
med-bio - Debian Med bioinformatics packages
med-bio-dev - Debian Med packages for development of bioinformatics application
med-cloud - Debian Med bioinformatics applications usable in cloud computing
med-config - Debian Med general config package
med-data - Debian Med drug databases
med-dental - Debian Med packages related to dental practice
med-epi - Debian Med epidemiology related packages
med-his - Debian Med suggestions for Hospital Information Systems
med-imaging - Debian Med image processing and visualization packages
med-imaging-dev - Debian Med image processing and visualization packages developmen
med-laboratory - Debian Med suggestions for medical laboratories
med-oncology - Debian Med packages for oncology
med-pharmacy - Debian Med packages for pharmaceutical research
med-physics - Debian Med packages for medical physicists
med-practice - Debian Med packages for practice management
med-psychology - Debian Med packages for psychology
med-research - Debian Med packages for medical research
med-statistics - Debian Med statistics
med-tasks - Debian Med tasks for tasksel
med-tools - Debian Med several tools
med-typesetting - Debian Med support for typesetting and publishing
Closes: 945659
Changes:
debian-med (3.5) unstable; urgency=medium
.
* Python2 packages only suggested
Closes: #945659
* Remove tophat since deprecated by upstream
* giira from Recommends to Suggests since it needs tophat
* lintian-override for field-too-long Recommends
.
* start of automatic changelog entry *
.
* Changes in metapackage dependencies
-med-bio
added:
Recommends: idefix, resfinder, purple, pufferfish
Suggests: skewer, giira
removed:
Recommends: giira, tophat
Suggests: mobyle-programs, mobyle-tutorials, mobyle
-med-bio-dev
added:
Recommends: python3-dnaio, python3-pyani, biobambam2, libcdk-java
Suggests: r-bioc-dada2, python-pbcommand, python-pbh5tools,
r-cran-dt, r-cran-proc, python-kineticstools, libfast-perl,
python-corepywrap, libmaus2-dev, python-pbcore,
r-cran-pcapp, r-cran-dynamictreecut, python-cogent,
r-cran-kaos
removed:
Recommends: python-pbh5tools, python-pbcommand, python-kineticstools,
python-corepywrap, libmaus2-dev, python-pbcore,
r-cran-dynamictreecut, python-cogent
-med-bio-ngs
removed:
Recommends: tophat
-med-cloud
added:
Recommends: hisat2
Suggests: python-cogent
removed:
Recommends: python-cogent, tophat
-med-imaging
added:
Suggests: python-nipype, python-nitime, python-dipy, python-nipy
removed:
Recommends: python-nipype, python-nitime, python-dipy, python-nipy
Suggests: tifffile
-med-imaging-dev
added:
Suggests: python-vigra, python-nipype, python-cfflib, python-nitime,
python-pyxnat, python-nipy, python-vmtk, python-dipy
removed:
Recommends: python-vigra, python-nipype, python-cfflib, python-nitime,
python-pyxnat, python-nipy, python-vmtk, python-dipy
-med-psychology
added:
Suggests: python-pyepl
removed:
Recommends: python-pypsignifit, python-pyepl
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Files:
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