Accepted exonerate 2.0.0-1 (source powerpc)
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Hash: SHA1
Format: 1.8
Date: Wed, 02 Jul 2008 11:24:48 +0900
Source: exonerate
Binary: exonerate
Architecture: source powerpc
Version: 2.0.0-1
Distribution: unstable
Urgency: low
Maintainer: Debian-Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Changed-By: Charles Plessy <plessy@debian.org>
Description:
exonerate - generic tool for pairwise sequence comparison
Closes: 479323
Changes:
exonerate (2.0.0-1) unstable; urgency=low
.
[ David Paleino ]
* Updated to Standards-Version 3.8.0 (no changes needed)
.
[ Charles Plessy ]
* New upstream release (Closes: #479323)
Quoting the upstream changelog:
o Modified exonerate to work in Client:Server mode
o Fixed --refine to work with SDP alignments
o Disabled codegen warnings from bootstrapper during compilation
o Added --geneticcode option for using alternative genetic codes
o Added --splice5 and --splice3 to allow alternative splice site PSSMs
o Fixed several bugs when scanning query sequences (eg. --forcescan query)
o Fixed to report query on forward strand whenever possible.
o Fixed --ryo sequence dumping with --bestn
o Fixed a bug with missing seeds when using --annotation
o Changed license to GPLv3
o Added protein2dna:bestfit and protein2genome:bestfit models
(works with exhaustive alignment only)
* Updated my email address.
* debian/control:
- Building on glib-2.0 instead of 1.2.
- Added a build dependancy on libreadline5-dev.
- Augmented the long description and changed the short.
- Added a build dependency on CDBS.
* debian/copyright made machine-readable.
* debian/rules switched to cdbs.
* debian/dirs: removed.
Checksums-Sha1:
9e310f92fd405d708fba0a53d6dac60b7f920ff5 1368 exonerate_2.0.0-1.dsc
0208c6201f22fc6b37792a8205a5255c97acb653 501817 exonerate_2.0.0.orig.tar.gz
dfcb976deebd95e31252c82fd68e786b6432d703 3810 exonerate_2.0.0-1.diff.gz
80964391928312b07b9b3f4fdc69424bc64a29fd 3198732 exonerate_2.0.0-1_powerpc.deb
Checksums-Sha256:
a507eab23827053c13bee01c4df190fad1ebf3a7d773e3eeca36d569a0ef1f58 1368 exonerate_2.0.0-1.dsc
57ef5d98ce5f9dbc3b21c0e7017b1832d142c36f342ed8d55bbe593e1bdb3a9c 501817 exonerate_2.0.0.orig.tar.gz
2dc17530908c782ecc30f8a1d36621fd912f01812b5ff4be912325a3068b6aec 3810 exonerate_2.0.0-1.diff.gz
dbaca20d46fa62aff3cd0c0637dafaad3de8326368f02876cd3816646a0c1bd5 3198732 exonerate_2.0.0-1_powerpc.deb
Files:
a9b68923a4be57e3eb0991ea45e9fd84 1368 science optional exonerate_2.0.0-1.dsc
d88202fce0539b1b236ca521a160c3ef 501817 science optional exonerate_2.0.0.orig.tar.gz
77cc703c6836b9ad9e4c7e06a626d4e0 3810 science optional exonerate_2.0.0-1.diff.gz
6d1fa6ca5a483f744f26a3455494e2f1 3198732 science optional exonerate_2.0.0-1_powerpc.deb
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Accepted:
exonerate_2.0.0-1.diff.gz
to pool/main/e/exonerate/exonerate_2.0.0-1.diff.gz
exonerate_2.0.0-1.dsc
to pool/main/e/exonerate/exonerate_2.0.0-1.dsc
exonerate_2.0.0-1_powerpc.deb
to pool/main/e/exonerate/exonerate_2.0.0-1_powerpc.deb
exonerate_2.0.0.orig.tar.gz
to pool/main/e/exonerate/exonerate_2.0.0.orig.tar.gz