Accepted htsjdk 2.14.3+dfsg-1 (source) into experimental
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Hash: SHA256
Format: 1.8
Date: Tue, 17 Apr 2018 15:14:40 +0200
Source: htsjdk
Binary: libhtsjdk-java libhtsjdk-java-doc
Architecture: source
Version: 2.14.3+dfsg-1
Distribution: experimental
Urgency: medium
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Changed-By: Andreas Tille <tille@debian.org>
Description:
libhtsjdk-java - Java API for high-throughput sequencing data (HTS) formats
libhtsjdk-java-doc - Documentation for the java HTSJDK library
Closes: 894289
Changes:
htsjdk (2.14.3+dfsg-1) experimental; urgency=medium
.
[ Andreas Tille ]
* New upstream version
Closes: #894289
* cme fix dpkg-control
* Standards-Version: 4.1.4
* Point Vcs-fields to salsa.d.o
* Update d/copyright
* d/rules: fix get-poms target
* Use 2to3 to convert Python script to Python3
.
[ Olivier Sallou ]
* d/patches/30-disable-scalatest.patch
Disable scala testing as scalatest is not available in Debian yet
* d/rules
* Fix JDK9 with --add-modules java.xml.bind in javadoc generation
* Fix javadoc generation
.
[TODO - O. Sallou in progress]
* Reintroduce unit tests now that gradle 3.4 is available in sid
- [done] new patch added for latest upstream, referencing junit classes
- [done] added testng() call in build.gradle with a patch and set test
call in d/rules back
- testng fails now with jcommander classnotfound exception, this is a
testng bug (#895886: testng: jcommander classes not found), wait to
be fixed to enable tests in d/rules
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Files:
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