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Hash: SHA512
Format: 1.8
Date: Thu, 25 Aug 2022 00:55:47 -0400
Source: ncbi-vdb
Binary: libkdf5-3 libkdf5-3-dbgsym libkdf5-dev libncbi-vdb-dev libncbi-vdb3 libncbi-vdb3-dbgsym libncbi-wvdb-dev libncbi-wvdb3 libncbi-wvdb3-dbgsym libsam-extract-dev libsam-extract3 libsam-extract3-dbgsym ncbi-vdb-data
Architecture: source amd64 all
Version: 3.0.0+dfsg2-1
Distribution: experimental
Urgency: medium
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Changed-By: Aaron M. Ucko <ucko@debian.org>
Description:
libkdf5-3 - hdf5 access to data in the INSDC Sequence Read Archives
libkdf5-dev - hdf5 access to data in the INSDC Sequence Read Archives (devel)
libncbi-vdb-dev - libraries for using data in the INSDC Sequence Read Archives (dev
libncbi-vdb3 - libraries for using data in the INSDC Sequence Read Archives
libncbi-wvdb-dev - virtual layer update module of ncbi-vdb library (devel)
libncbi-wvdb3 - virtual layer update module of ncbi-vdb library
libsam-extract-dev - SAM extraction module of ncbi-vdb library (devel)
libsam-extract3 - SAM extraction module of ncbi-vdb library
ncbi-vdb-data - schemata and defaults for the INSDC Sequence Read Archives
Changes:
ncbi-vdb (3.0.0+dfsg2-1) experimental; urgency=medium
.
* Merge (or port, as appropriate) changes from 2.11.2+dfsg-5.
- Account for changes to the binary package inventory.
- Account for layout changes.
- Extend upstream's copyright through 2022.
* .gitignore: Also ignore obj-* and test/vdb/kfg/*/user-settings.mkfg.
* debian/control: Drop unneeded build dependencies: libngs-* and
default-jdk-headless. Keeping libngs-* would have resulted in a
dependency cycle with sra-sdk 3.x (which incorporates ngs-sdk), and
default-jdk-headless is heavy.
* debian/copyright: Additionally exclude */vdb3/jwt-tool/googletest,
which came to my attention over formal line-ending mismatches relative
to the tarball (specifically in Visual Studio files).
* debian/rules: Clean up fully between builds.
* debian/watch: Adjust dversionmangle to allow digits after +dfsg, per
the use of +dfsg2 for now.
.
ncbi-vdb (3.0.0+dfsg-1) experimental; urgency=medium
.
* New upstream version
* Switch to cmake build system
* Reflect SONAME bump in package names
* Library libvdb-sqlite is not provided by upstream any more which
builds libsam-extract as new library. Binary packages are adapted
accordingly
* Review copyright
* Remove RPATH
* Standards-Version: 4.6.1
.
ncbi-vdb (2.11.2+dfsg-5) unstable; urgency=medium
.
* .gitignore: Also ignore libs/jni/jni(_md).h.
* debian/.gitignore (new): Ignore generated files and subtrees.
* debian/control:
- Clean up descriptions. In particular, use a modern synopsis cribbed
from vdb3/README.md as a first paragraph across the board.
- Note that all packages already qualify as Multi-Arch: same.
- Introduce ncbi-vdb-data (M-A: foreign) and have libncbi-(w)vdb2
depend on it.
* debian/copyright:
- Resync details with tarball contents.
- Stop claiming Upstream-Name: ngs.
* debian/ncbi-vdb-data.install: Rename from libncbi-vdb2.install. (It
listed only default configuration files, with d-shlibs taking care
of the rest.)
* debian/rules: Move schemata to ncbi-vdb-data, not libncbi-vdb2.
* Standards-Version: 4.6.1 (routine-update)
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