Accepted python-biopython 1.80+dfsg-1 (source) into unstable
- To: debian-devel-changes@lists.debian.org
- Subject: Accepted python-biopython 1.80+dfsg-1 (source) into unstable
- From: Debian FTP Masters <ftpmaster@ftp-master.debian.org>
- Date: Mon, 28 Nov 2022 22:20:39 +0000
- Debian: DAK
- Debian-architecture: source
- Debian-archive-action: accept
- Debian-changes: python-biopython_1.80+dfsg-1_source.changes
- Debian-source: python-biopython
- Debian-suite: unstable
- Debian-version: 1.80+dfsg-1
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-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512
Format: 1.8
Date: Mon, 28 Nov 2022 22:19:25 +0100
Source: python-biopython
Architecture: source
Version: 1.80+dfsg-1
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Changed-By: Étienne Mollier <emollier@debian.org>
Closes: 1024855 1024858 1024986 1025014 1025022
Changes:
python-biopython (1.80+dfsg-1) unstable; urgency=medium
.
* Migrate biopython 1.80 from experimental to unstable.
Closes: #1024986, #1024858, #1024855, #1025014, #1025022
.
python-biopython (1.80+dfsg-1~0exp0) experimental; urgency=medium
.
* New upstream version
* Standards-Version: 4.6.1 (routine-update)
* Set upstream metadata fields: Security-Contact.
* privacy_breach_ie9.patch: refresh.
* adjust-test_GraphicsBitmaps.patch: delete; applied upstream.
* spelling.patch: delete; applied upstream.
* mkdssp4.patch: delete; fixed upstream.
* d/control: remove test dependency on problematic packages; muscle 5
wrapping is unsupported upstream, and t_coffee suffers from segmentation
faults documented in #1022570
* croak-on-muscle5.patch: add; raise RuntimeError with muscle 5.
* d/NEWS: describe incompatibility with muscle 5; also describe possible
workarounds.
* d/not-installed: add tree1 and other_trees.
* d/*.lintian-overrides: refresh override.
* debian/python3-biopython.lintian-overrides: override typo; the reported
spelling error does not seem to match anything meaningful on the side of
the source code.
* d/s/lintian-overrides: indicate location of Restriction.md, source of
Restriction.html.
* d/copyright: bump copyright years.
* muscle3.patch: add; default to use muscle3 command if available.
This is in preparation of the availability of a dedicated muscle3
package with the explicitly versioned command, since muscle 5 is a very
different program but can be installed in parallel.
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