samtools
processing sequence alignments in SAM, BAM and CRAM formats

NEW: Take a look at the new package tracker: tracker.debian.org/pkg/samtools

general

source
samtools (source, science)
version
1.9-1
maint
Debian Med Packaging Team (a), Charles Plessy (u), Andreas Tille (u)
arch
any all
std-ver
4.2.1
VCS
Git (browse)

binaries

todo

problems

  • The package has not yet entered testing even though the 2-day delay is over. Check why.

testing migration

excuses:
  • Migration status: BLOCKED: Rejected/introduces a regression
  • 61 days old (needed 2 days)
  • missing build on i386: samtools (from 1.7-2)
  • old binaries left on all: samtools-test (from 1.7-2) (but ignoring cruft, so nevermind)
  • Piuparts tested OK - https://piuparts.debian.org/sid/source/s/samtools.html
  • Required age reduced by 3 days because of autopkgtest
  • samtools unsatisfiable Build-Depends(-Arch) on i386: libhts-dev (>= 1.9)
  • Depends: samtools htslib
  • Build-Depends(-Arch): samtools htslib

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bugs

all bug history graph
0
RC
0
I&N
0
M&W
0
F&P
0